@ Ontology Change Report @ First ontology URI: file:///srv/ncbo/share/env/prod/repository/FYPO/157/fypo.obo @ Second ontology URI: file:///srv/ncbo/share/env/prod/repository/FYPO/156/fypo.obo @ File Written at 2013.11.20 at 12:51:10 PST @ Number of classes changed: 19 @ Number of classes added: 7 @Classes modified from previous --- Class Changed: http://www.geneontology.org/go#GO_0000280 label: nuclear division - SubClassOf('nuclear division' ObjectSomeValueFrom('part_of' 'cell division')) --- Class Changed: http://www.geneontology.org/go#FYPO_0002904 label: inviable pear-shaped vegetative cell - SubClassOf('inviable pear-shaped vegetative cell' ObjectSomeValueFrom('has_part' 'inviable vegetative cell')) - SubClassOf('inviable pear-shaped vegetative cell' 'pear-shaped vegetative cell') - SubClassOf('inviable pear-shaped vegetative cell' ObjectSomeValueFrom('has_part' 'pear-shaped cell')) - SubClassOf('inviable pear-shaped vegetative cell' ObjectSomeValueFrom('exists_during' 'single-celled organism vegetative growth phase')) - SubClassOf('inviable pear-shaped vegetative cell' 'inviable vegetative cell with abnormal cell shape') - EquivalentClasses('inviable pear-shaped vegetative cell' ObjectIntersectionOf('cell phenotype' ObjectSomeValueFrom('exists_during' 'single-celled organism vegetative growth phase') ObjectSomeValueFrom('has_part' 'pear-shaped cell') ObjectSomeValueFrom('has_part' 'inviable vegetative cell')) ) --- Class Changed: http://www.geneontology.org/go#GO_0051783 label: regulation of nuclear division - SubClassOf('regulation of nuclear division' 'regulation of cell division') --- Class Changed: http://www.geneontology.org/go#FYPO_0000625 label: abnormal premeiotic DNA replication - SubClassOf('abnormal premeiotic DNA replication' 'abnormal meiotic cell cycle') --- Class Changed: http://www.geneontology.org/go#GO_0000915 label: cytokinesis, actomyosin contractile ring assembly - SubClassOf('cytokinesis, actomyosin contractile ring assembly' 'actomyosin structure organization') --- Class Changed: http://www.geneontology.org/go#FYPO_0001934 label: abolished cell population growth on glycerol carbon source + SubClassOf('abolished cell population growth on glycerol carbon source' ObjectSomeValueFrom('qualifier' PATO_0000467)) + SubClassOf('abolished cell population growth on glycerol carbon source' ObjectSomeValueFrom('inheres_in' 'culture medium')) + SubClassOf('abolished cell population growth on glycerol carbon source' ObjectSomeValueFrom('towards' 'glycerol')) + EquivalentClasses('abolished cell population growth on glycerol carbon source' ObjectIntersectionOf('abolished vegetative cell population growth' ObjectSomeValueFrom('inheres_in' 'culture medium') ObjectSomeValueFrom('qualifier' PATO_0000467) ObjectSomeValueFrom('towards' 'glycerol')) ) --- Class Changed: http://www.geneontology.org/go#FYPO_0000243 label: normal cell population growth on proline nitrogen source + SubClassOf('normal cell population growth on proline nitrogen source' ObjectSomeValueFrom('towards' 'L-proline')) + EquivalentClasses('normal cell population growth on proline nitrogen source' ObjectIntersectionOf('normal cell population growth' ObjectSomeValueFrom('inheres_in' 'culture medium') ObjectSomeValueFrom('qualifier' PATO_0000467) ObjectSomeValueFrom('towards' 'L-proline')) ) + SubClassOf('normal cell population growth on proline nitrogen source' ObjectSomeValueFrom('inheres_in' 'culture medium')) + SubClassOf('normal cell population growth on proline nitrogen source' ObjectSomeValueFrom('qualifier' PATO_0000467)) --- Class Changed: http://www.geneontology.org/go#FYPO_0000250 label: decreased cell population growth on proline nitrogen source + SubClassOf('decreased cell population growth on proline nitrogen source' ObjectSomeValueFrom('qualifier' PATO_0000467)) + SubClassOf('decreased cell population growth on proline nitrogen source' ObjectSomeValueFrom('inheres_in' 'culture medium')) + SubClassOf('decreased cell population growth on proline nitrogen source' ObjectSomeValueFrom('towards' 'L-proline')) + EquivalentClasses('decreased cell population growth on proline nitrogen source' ObjectIntersectionOf('decreased cell population growth' ObjectSomeValueFrom('inheres_in' 'culture medium') ObjectSomeValueFrom('qualifier' PATO_0000467) ObjectSomeValueFrom('towards' 'L-proline')) ) --- Class Changed: http://www.geneontology.org/go#FYPO_0000249 label: decreased cell population growth on ammonia nitrogen source + EquivalentClasses('decreased cell population growth on ammonia nitrogen source' ObjectIntersectionOf('decreased cell population growth' ObjectSomeValueFrom('inheres_in' 'culture medium') ObjectSomeValueFrom('qualifier' PATO_0000467) ObjectSomeValueFrom('towards' CHEBI_16134)) ) + SubClassOf('decreased cell population growth on ammonia nitrogen source' ObjectSomeValueFrom('qualifier' PATO_0000467)) + SubClassOf('decreased cell population growth on ammonia nitrogen source' ObjectSomeValueFrom('towards' CHEBI_16134)) + SubClassOf('decreased cell population growth on ammonia nitrogen source' ObjectSomeValueFrom('inheres_in' 'culture medium')) --- Class Changed: http://www.geneontology.org/go#FYPO_0000251 label: decreased cell population growth on galactose carbon source + EquivalentClasses('decreased cell population growth on galactose carbon source' ObjectIntersectionOf('decreased cell population growth' ObjectSomeValueFrom('inheres_in' 'culture medium') ObjectSomeValueFrom('qualifier' PATO_0000467) ObjectSomeValueFrom('towards' 'D-galactose')) ) + SubClassOf('decreased cell population growth on galactose carbon source' ObjectSomeValueFrom('towards' 'D-galactose')) + SubClassOf('decreased cell population growth on galactose carbon source' ObjectSomeValueFrom('inheres_in' 'culture medium')) + SubClassOf('decreased cell population growth on galactose carbon source' ObjectSomeValueFrom('qualifier' PATO_0000467)) --- Class Changed: http://www.geneontology.org/go#FYPO_0001576 label: abolished cell population growth on dipeptide nitrogen source + SubClassOf('abolished cell population growth on dipeptide nitrogen source' ObjectSomeValueFrom('inheres_in' 'culture medium')) + EquivalentClasses('abolished cell population growth on dipeptide nitrogen source' ObjectIntersectionOf('abolished vegetative cell population growth' ObjectSomeValueFrom('inheres_in' 'culture medium') ObjectSomeValueFrom('qualifier' PATO_0000467) ObjectSomeValueFrom('towards' CHEBI_46761)) ) + SubClassOf('abolished cell population growth on dipeptide nitrogen source' ObjectSomeValueFrom('qualifier' PATO_0000467)) + SubClassOf('abolished cell population growth on dipeptide nitrogen source' ObjectSomeValueFrom('towards' CHEBI_46761)) --- Class Changed: http://www.geneontology.org/go#GO_0044818 label: mitotic G2/M transition checkpoint - SubClassOf('mitotic G2/M transition checkpoint' 'mitotic cell cycle checkpoint') --- Class Changed: http://www.geneontology.org/go#GO_0000912 label: assembly of actomyosin apparatus involved in cytokinesis + SubClassOf('assembly of actomyosin apparatus involved in cytokinesis' 'actomyosin structure organization') --- Class Changed: http://www.geneontology.org/go#GO_0033314 label: mitotic DNA replication checkpoint - SubClassOf('mitotic DNA replication checkpoint' 'mitotic G2/M transition checkpoint') --- Class Changed: http://www.geneontology.org/go#FYPO_0002043 label: normal premeiotic DNA replication - SubClassOf('normal premeiotic DNA replication' 'normal cell cycle') --- Class Changed: http://www.geneontology.org/go#GO_0006279 label: premeiotic DNA replication - SubClassOf('premeiotic DNA replication' 'meiotic cell cycle') --- Class Changed: http://www.geneontology.org/go#FYPO_0001409 label: normal cell population growth on glycerol carbon source + SubClassOf('normal cell population growth on glycerol carbon source' ObjectSomeValueFrom('qualifier' PATO_0000467)) + EquivalentClasses('normal cell population growth on glycerol carbon source' ObjectIntersectionOf('normal cell population growth' ObjectSomeValueFrom('inheres_in' 'culture medium') ObjectSomeValueFrom('qualifier' PATO_0000467) ObjectSomeValueFrom('towards' 'glycerol')) ) + SubClassOf('normal cell population growth on glycerol carbon source' ObjectSomeValueFrom('towards' 'glycerol')) + SubClassOf('normal cell population growth on glycerol carbon source' ObjectSomeValueFrom('inheres_in' 'culture medium')) --- Class Changed: http://www.geneontology.org/go#FYPO_0000242 label: normal cell population growth on ammonia nitrogen source + SubClassOf('normal cell population growth on ammonia nitrogen source' ObjectSomeValueFrom('towards' CHEBI_16134)) + SubClassOf('normal cell population growth on ammonia nitrogen source' ObjectSomeValueFrom('qualifier' PATO_0000467)) + SubClassOf('normal cell population growth on ammonia nitrogen source' ObjectSomeValueFrom('inheres_in' 'culture medium')) + EquivalentClasses('normal cell population growth on ammonia nitrogen source' ObjectIntersectionOf('normal cell population growth' ObjectSomeValueFrom('inheres_in' 'culture medium') ObjectSomeValueFrom('qualifier' PATO_0000467) ObjectSomeValueFrom('towards' CHEBI_16134)) ) --- Class Changed: http://www.geneontology.org/go#FYPO_0002903 label: viable pear-shaped vegetative cell - SubClassOf('viable pear-shaped vegetative cell' ObjectSomeValueFrom('has_part' 'pear-shaped cell')) - EquivalentClasses('viable pear-shaped vegetative cell' ObjectIntersectionOf('cell phenotype' ObjectSomeValueFrom('exists_during' 'single-celled organism vegetative growth phase') ObjectSomeValueFrom('has_part' 'pear-shaped cell') ObjectSomeValueFrom('has_part' 'viable vegetative cell')) ) - SubClassOf('viable pear-shaped vegetative cell' 'viable vegetative cell with abnormal cell shape') - SubClassOf('viable pear-shaped vegetative cell' 'pear-shaped vegetative cell') - SubClassOf('viable pear-shaped vegetative cell' ObjectSomeValueFrom('has_part' 'viable vegetative cell')) - SubClassOf('viable pear-shaped vegetative cell' ObjectSomeValueFrom('exists_during' 'single-celled organism vegetative growth phase')) @New Classes --- !New Class!: http://www.geneontology.org/go#CHEBI_33242 label: inorganic hydride + SubClassOf('inorganic hydride' 'inorganic molecular entity') + SubClassOf('inorganic hydride' 'hydrides') --- !New Class!: http://www.geneontology.org/go#CHEBI_35106 label: nitrogen hydride + SubClassOf('nitrogen hydride' 'nitrogen molecular entity') + SubClassOf('nitrogen hydride' 'pnictogen hydride') --- !New Class!: http://www.geneontology.org/go#CHEBI_37176 label: mononuclear parent hydride + SubClassOf('mononuclear parent hydride' 'hydrides') --- !New Class!: http://www.geneontology.org/go#CHEBI_35107 label: azane + SubClassOf('azane' 'nitrogen hydride') --- !New Class!: http://www.geneontology.org/go#CHEBI_16134 label: ammonia + SubClassOf('ammonia' 'mononuclear parent hydride') + SubClassOf('ammonia' 'azane') --- !New Class!: http://www.geneontology.org/go#CHEBI_35881 label: pnictogen hydride + SubClassOf('pnictogen hydride' 'pnictogen molecular entity') + SubClassOf('pnictogen hydride' 'inorganic hydride') --- !New Class!: http://www.geneontology.org/go#CHEBI_46761 label: dipeptide + SubClassOf('dipeptide' 'oligopeptide')